2027 Summer Intern - Computational Science

Roche • Santa Clara, CA • 2h ago

At Roche you can show up as yourself, embraced for the unique qualities you bring. Our culture encourages personal expression, open dialogue, and genuine connections, where you are valued, accepted and respected for who you are, allowing you to thrive both personally and professionally. This is how we aim to prevent, stop and cure diseases and ensure everyone has access to healthcare today and for generations to come. Join Roche, where every voice matters.

The Position

We advance science so that we all have more time with the people we love .

Department Summary

The XOOS Algorithm Development team leads secondary analysis algorithm development for Sequencing by Expansion (SBX) data on the AXELIOS platform. We bridge rapid R&D prototyping with production-grade bioinformatics tools, driving multi-omics whole genome and targeted sequencing applications across oncology, genetic disease, and infectious disease.

This internship position is fully remote.

The Opportunity

Algorithm Development.

Benchmarking.

Software development.

Presenting results to stakeholders.

Program Highlights

Intensive 12-weeks, full-time (40 hours per week) paid internship.

Program start dates are in May/June (Summer).

A stipend, based on location, will be provided to help alleviate costs associated with the internship.

Ownership of challenging and impactful business-critical projects.

Work with some of the most talented people in the biotechnology industry.

Who You Are

Required Education:

Must be pursuing a PhD (enrolled student).

Required Majors: Bioinformatics, Computer Science, Computational Biology.

Required Skills

Advanced experience developing bioinformatics algorithms for secondary analysis of sequencing data.

Demonstrated expertise in detecting genetic variation in challenging genomic @contexts, including repeat regions, paralogs, pseudogenes, and highly homologous loci.

Strong understanding of haplo@type phasing, read alignment, local or de novo assembly, scaffolding, and pangenome methods.

Experience developing tools for one or more of the following:Repeat expansion or repeat-geno@type analysis, Paralog- or pseudogene-aware variant calling, Long-read or highly accurate sequencing analysis, Haplo@type reconstruction and phasing, De novo or targeted assembly, Graph genomes or pangenome analysis.

Strong programming skills in Python and/or C++, with experience building reproducible, tested software.

Experience evaluating algorithms with representative datasets and quantitative performance metrics.

Currently enrolled in or recently graduated from a degree program in bioinformatics, computational biology, computer science, statistics, mathematics, genomics, or a related field.

Preferred Knowledge, Skills, and Qualifications

Demonstrated record of publications, preprints, or equivalent technical contributions describing novel algorithms or methods for variant detection and genotyping.

Research experience focused on difficult-to-map regions of the genome, including repeats, paralogs, pseudogenes, segmental duplications, and other highly homologous loci.

Publications or documented contributions involving one or more of the following:Repeat-variant detection or genotyping, Haplo@type phasing and reconstructionLocal, targeted, or de novo assembly, Scaffolding and contig generation, Pangenome or graph-based analysisLong-read sequencing analysis, Paralog- or pseudogene-aware variant calling.

Ability to explain algorithmic innovations, validation methodology, limitations, and performance results clearly.

Evidence of translating research methods into reproducible proto@types or usable bioinformatics tools.

Relocation benefits are not available for this job posting.

The expected salary range for this position based on the primary location of California is $47.00-$52.00 per hour. Actual pay will be determined based on experience, qualifications, geographic location, and other job-related factors permitted by law. This position also qualifies for paid holiday time off benefits.

Who we are

A healthier future drives us to innovate. Together, more than 100'000 employees across the globe are dedicated to advance science, ensuring everyone has access to healthcare today and for generations to come. Our efforts result in more than 26 million people treated with our medicines and over 30 billion tests conducted using our Diagnostics products. We empower each other to explore new possibilities, foster creativity, and keep our ambitions high, so we can deliver life-changing healthcare solutions that make a global impact.

Let's build a healthier future, together.

Roche is an equal opportunity employer. It is our policy and practice to employ, promote, and otherwise treat any and all employees and applicants on the basis of merit, qualifications, and competence. The company's policy prohibits unlawful discrimination, including but not limited to, discrimination on the basis of Protected Veteran status, individuals with disabilities status, and consistent with all federal, state, or local laws.

If you have a disability and need an accommodation in relation to the online application process, please contact us by completing this form Accommodations for Applicants (https://docs.google.com/forms/d/e/1FAIpQLSdZWlsbfQOvFVIQgHE_iDzWUTlhZvj6FytIzjS7xq6IGh1H5g/viewform) .

Roche

Go to Apply

Share this job

Similar Jobs

Critical Care Physician (Intensivist)

Sound Physicians • Castro Valley, CA • 9min ago

Hospital & Medical

Critical Care Physician (Intensivist) Castro Valley, California ATS: Salesforce Job ID: JOB-001388 Category: Critical Care Transform patient care and community as a Critical Care Physician in San Francisco East Bay Our m...

9min ago

Go to Apply

AI Research Scientist, FAIR Security, Privacy, and Reliability

Meta • Menlo Park, CA • 22min ago

Summary: The FAIR Security, Privacy, and Reliability team breaks and fixes agents and the foundational models that power them. We conduct fundamental research to discover novel attacks, measure privacy, and find non-intu...

22min ago

Go to Apply

Manager, Coding Quality Review

Kaiser Permanente • Santa Clara, CA • 24min ago

Management & Administrative

Job Summary: Manages coding quality audits by training and coordinating team members on best practices in conducting special projects, audits, reviews, and/or monitoring. Manages audit analysis and report writing by lead...

24min ago

Go to Apply

Lead Group Product Manager, Ads and Commerce, Payments Risk

Google • Mountain View, CA • 24min ago

Management & Administrative

Lead Group Product Manager, Ads and Commerce, Payments Risk Share Lead Group Product Manager, Ads and Commerce, Payments Risk corporatefare_ Google place Mountain View, CA, USA Advanced Experience owning outcomes and dec...

24min ago

Go to Apply

Staff UX Quantitative Researcher, Agentic AI Ad Sales

Google • Mountain View, CA • 24min ago

Sales & Marketing

Staff UX Quantitative Researcher, Agentic AI Ad Sales Share Staff UX Quantitative Researcher, Agentic AI Ad Sales corporatefare_ Google place Mountain View, CA, USA Advanced Experience owning outcomes and decision making...

24min ago

Go to Apply

Senior Manager, Business Data Scientist, Search+, GBO Product Finance

Google • Mountain View, CA • 26min ago

Finance, Accounting & Banking

Senior Manager, Business Data Scientist, Search+, GBO Product Finance Share Senior Manager, Business Data Scientist, Search+, GBO Product Finance corporatefare_ Google place Mountain View, CA, USA; New York, NY, USA Adva...

26min ago

Go to Apply

AI Engineer / Data Scientist, AI Director

PwC • San Jose, CA • 26min ago

IT & Engineering

The Opportunity As part of the AI Engineering team within the Digital Assurance & Technology team, you will lead the design and delivery of AI and machine learning solutions that transform data into actionable insigh...

26min ago

Go to Apply

Staff Research Data Scientist, Discover Experience

Google • Mountain View, CA • 26min ago

IT & Engineering

Staff Research Data Scientist, Discover Experience Share Staff Research Data Scientist, Discover Experience corporatefare_ Google place Mountain View, CA, USA Advanced Experience owning outcomes and decision making, solv...

26min ago

Go to Apply

Associate General Counsel, AI Product

Meta • Menlo Park, CA • 27min ago

Legal & Paralegal

Summary: Meta's Product Counsel organization provides strategic legal advice and risk mitigation to product, engineering, and business teams across Meta's family of products and services. The organization partners cross-...

27min ago

Go to Apply

Payer Healthcare Data Scientist, Senior Manager

PwC • San Jose, CA • 29min ago

Hospital & Medical

The Opportunity As a Payer Healthcare Data Scientist you will focus on advanced analytics and statistical techniques to extract insights from large datasets and support data-driven decision making within our Advisory pra...

29min ago

Go to Apply

Subscribe to get new jobs sent directly to you
(no charge, cancel anytime)