Senior Research Engineer

NYU Grossman School of Medicine • New York, NY • 2h ago

NYU Grossman School of Medicine is one of the nation's top-ranked medical schools. For 175 years, NYU Grossman School of Medicine has trained thousands of physicians and scientists who have helped to shape the course of medical history and enrich the lives of countless people. An integral part of NYU Langone Health, the Grossman School of Medicine at its core is committed to improving the human condition through medical education, scientific research, and direct patient care. At NYU Langone Health, equity and inclusion are fundamental values. We strive to be a place where our exceptionally talented faculty, staff, and students of all identities can thrive. We embrace inclusion and individual skills, ideas, and knowledge. For more information, go to med.nyu.edu, and interact with us on LinkedIn, Glassdoor, Indeed, Facebook, Twitter and Instagram.Position Summary: We have an exciting opportunity to join our team as a Senior Research Engineer. The Sr. Research Engineer (Bioinformatics) is a member of the Keating Lab (Molecular Science Core) and will be responsible for software development, maintenance, and troubleshooting mainly around the large-scale implementation of whole genome sequencing analytics in the research, translational, and clinical setting in the Department of Surgery led by Dr. Brendan Keating.Job Responsibilities:Development, engineering, maintenance, and troubleshooting of lab developed software, including basic statistical and machine learning algorithms, data processing and QC pipelines, data visualization, graphical user interface, and clinical interpretation software. Spearheading the development new software directions including incorporation of AI / ML into lab tools. Contributes to fundamental method development including statistical, machine learning, and optimization based approaches. Provides systems support for the Keating Lab, including first level troubleshooting of database and software-related problems. Supports lead data organization across flat files and databases. Supports lab members execute and scale large genomic analyses. Regularly presents and summarizes results to team members at lab meetings and helps lead specialized team meetings dedicated to algorithm development. Supports the PI functionally manage team members including writing, curating, and prioritizing task lists for bioinformatics staff (including Bioinformatics analysts) and trainees in the group who are engaged in software development. Supports with recruiting new members to the group and help with tracking performance. Candidate should have experience with single-nuclei RNA sequencing analyses. It would be advantage if the candidate has experience with the wet-lab protocols for these snRNAseq techniques Candidate should have experience with single-cell methylation analyses and analyses thereof. Candidate should have experience with Python, and similar coding languagesMinimum Qualifications: To qualify you must have a Education: B.S. in Bioinformatics, Computer Science, Computer / Electrical Engineering, or related quantitative fields Experience: B.S. / M.S. and 5+ years of experience with sequencing data Experience creating sequencing analysis pipelines Ability to work independently while collaborating and assisting the team in its common research goals Attention to detail and ability to work on multiple projects is necessary Experience with software engineering best practices including continuous integration Experience in Unix/Linux systems including HPC and cloud environments Facility with R and Python Excellent communication skills with proficiency in written and oral English Knowledge, Skills and Abilities: Basic knowledge of cancer biology, genetics, and genomicsPreferred Qualifications: Ph.D. that includes 3+ years (including dissertation

Similar Jobs

EY-Parthenon - Strategy and Execution - Growth Platforms - Data Scientist - Director

EY • Hoboken, NJ • 1h ago

IT & Engineering

Location: Atlanta, Boston, Chicago, Dallas, Denver, Detroit, Houston, Los Angeles, McLean, New York, Hoboken, Philadelphia, San Francisco, Seattle At EY, we're all in to shape your future with confidence. We'll help you...

1h ago

Go to Apply

EY-Parthenon - Strategy and Execution - Growth Platforms - Data Scientist - Director

EY • New York, NY • 1h ago

IT & Engineering

1h ago

Go to Apply

Business Data Scientist, Impact Measurement

Google • New York, NY • 2h ago

IT & Engineering

Business Data Scientist, Impact Measurement corporatefare_ Google place San Bruno, CA, USA; Mountain View, CA, USA; +2 more; +1 more Mid Experience driving progress, solving problems, and mentoring more junior team membe...

2h ago

Go to Apply

Data Scientist, Product

Meta • New York, NY • 2h ago

IT & Engineering

Summary: Meta Platforms, Inc. (Meta), formerly known as Facebook Inc., builds technologies that help people connect, find communities, and grow businesses. When Facebook launched in 2004, it changed the way people connec...

2h ago

Go to Apply

EY-Parthenon - Strategy and Execution - Growth Platforms - AI ML Engineering - Director

EY • Hoboken, NJ • 2h ago

IT & Engineering

2h ago

Go to Apply

Senior Associate - AI Engineer

New York Life Insurance Company • New York, NY • 2h ago

IT & Engineering

Location Designation: [[cust_rolelocationdesignation]] As part of Technology, you'll have the opportunity to contribute to groundbreaking initiatives that shape New York Life's digital landscape. Leverage cutting-edge te...

2h ago

Go to Apply

EY-Parthenon - Strategy and Execution - Growth Platforms - AI ML Engineering - Director

EY • New York, NY • 2h ago

IT & Engineering

2h ago

Go to Apply

Telecom GIS Data Analyst - Market Expansion (Capacity Planning)

TEKsystems • New York, NY • 6h ago

IT & Engineering

Job Title: GIS Data Analyst - Market Expansion Location: Remote (open to candidates nationwide) Employment Type: Long-Term Contract Client Industry: Telecommunications Openings: 2 Positions Mandatory Requirement Applican...

6h ago

Go to Apply

Syndications Capital Markets Specialist (hybrid)

First-Citizens Bank & Trust Company • New York, NY • 6h ago

IT & Engineering

Overview This is a hybrid role with the expectation that time working will regularly take place inside and outside of a company office.First Citizens offer you the strength and stability of a diversified financial instit...

6h ago

Go to Apply

Electrical Designer

Actalent • New York, NY • 6h ago

IT & Engineering

Job Title: Electrical Designer Job Description We are seeking a skilled Electrical Designer with a strong background in electrical engineering and design. The ideal candidate will possess a Bachelor's degree in Electrica...

6h ago

Go to Apply

Subscribe to get new jobs sent directly to you
(no charge, cancel anytime)

This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.